STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XTN6rRNA-processing arch domain-containing protein. (848 aa)    
Predicted Functional Partners:
A0A4P9XWY0
Ribosomal protein S5 domain 2-type protein.
   
 0.995
A0A4P9XXT3
Exosome component Rrp46.
   
 0.995
A0A4V1IXI3
WD40-repeat-containing domain protein.
   
 0.993
A0A4P9XSL2
Uncharacterized protein.
   
 0.990
A0A4P9XVB6
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.990
A0A4P9XXE4
S1 domain-containing protein.
   
 0.990
A0A4P9XWZ7
Ribosomal protein S5 domain 2-type protein.
   
 0.989
A0A4P9XGS3
RanBD1 domain-containing protein.
   
 0.988
A0A4P9XHN7
C2H2-type domain-containing protein.
   
 0.988
A0A4P9XPF4
Ribosomal protein S5 domain 2-type protein.
   
 0.988
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.