STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XV62Iron sulfur cluster assembly protein 1; Belongs to the NifU family. (135 aa)    
Predicted Functional Partners:
A0A4P9XRH6
Pyridoxal phosphate-dependent transferase.
  
 0.999
A0A4P9XWU5
NFS1 nitrogen fixation 1.
 
 0.999
A0A4V1IWG5
LYR motif containing 4; Belongs to the complex I LYR family.
    
 0.998
A0A4P9XJX6
Pyridoxal phosphate-dependent transferase.
  
 0.996
A0A4V1IWL4
Co-chaperone HscB, C-terminal oligomerization domain-containing protein.
 
 
 0.996
A0A4P9XVW4
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.929
A0A4P9XNC0
Fe-S_biosyn domain-containing protein.
  
  
 0.926
A0A4P9XKC5
HesB/YadR/YfhF.
  
  
 0.918
A0A4P9XK27
Uncharacterized protein.
  
 0.890
A0A4P9XW52
Scaffold protein Nfu/NifU N terminal-domain-containing protein.
  
 
 0.842
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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