STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XV92Ubiquitin specific protease 48 isoform b. (189 aa)    
Predicted Functional Partners:
A0A4P9XQP3
Ubiquitin-like domain-containing protein.
    
 0.799
A0A4P9XRG8
Ubiquitin-like domain-containing protein.
   
 0.790
A0A4P9XVI2
Ubiquitin-like domain-containing protein.
   
 0.790
A0A4V1IXG7
Polyubiquitin.
   
 0.790
A0A4P9XK95
XPC-binding domain-containing protein.
    
 0.782
A0A4P9XQQ5
Uncharacterized protein.
    
 0.761
A0A4P9XHI0
Uncharacterized protein.
    
 0.728
A0A4P9XZ56
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.728
A0A4P9XW19
WD40-repeat-containing domain protein.
    
 0.688
A0A4P9XYV0
Uncharacterized protein.
   
 
 0.660
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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