STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (964 aa)    
Predicted Functional Partners:
A0A4P9XZ08
Uncharacterized protein.
   
 0.940
A0A4P9XMA9
Anaphase-promoting complex, cyclosome, subunit 4-domain-containing protein.
   
 0.936
A0A4P9XI32
APC1_C domain-containing protein.
    
 0.933
A0A4P9XKJ6
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.933
A0A4P9XV69
Anaphase-promoting complex subunit 11.
    
 0.932
A0A4P9XQD4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.931
A0A4P9XJ23
Uncharacterized protein.
   
 0.911
A0A4P9XIR9
tRNA-binding domain-containing protein.
  
 
 0.864
A0A4P9XJ22
Tyrosine--tRNA ligase.
  
 
 0.864
A0A4P9XQK7
Kinase-like domain-containing protein.
    
 0.856
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.