STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XYV9E3 ubiquitin protein ligase. (791 aa)    
Predicted Functional Partners:
A0A4P9XQ18
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.994
A0A4P9XU44
Leo1-like protein-domain-containing protein.
   
 0.991
A0A4P9XSK4
RNA pol II accessory factor, Cdc73 family-domain-containing protein.
   
 0.867
A0A4P9XVG6
RNA polymerase II-associated.
    
 0.859
A0A4P9XPA3
Uncharacterized protein.
   
 0.825
A0A4P9XY26
Uncharacterized protein.
   
 0.814
A0A4P9XLG6
Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.792
A0A4P9XJV9
Ubiquitin-conjugating enzyme/RWD-like protein.
   
 0.777
A0A4P9XPR3
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.774
A0A4P9XIQ0
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.772
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.