STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XZ58Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
A0A4P9XTN6
rRNA-processing arch domain-containing protein.
   
 
 0.747
A0A4P9XL48
Rrp15p-domain-containing protein.
   
   0.746
A0A4P9XPM4
Ribonuclease H-like domain-containing protein.
   
   0.731
A0A4P9XNC6
Ribosomal protein L16p/L10e-domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
  0.609
A0A4P9XKS1
RRM domain-containing protein.
   
 
 0.563
A0A4P9XRI1
ATG C terminal domain-containing protein.
 
      0.557
A0A4V1IWA4
Uncharacterized protein.
   
 
 0.546
A0A4P9XHH9
Putative transformer-SR ribonucleo protein.
    
 
 0.537
A0A4V1IXB9
60S ribosomal protein L10-A.
   
  0.525
A0A4P9XTT5
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
    0.522
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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