STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1IWR5WD_REPEATS_REGION domain-containing protein. (2196 aa)    
Predicted Functional Partners:
A0A4P9XJK8
Vps16_N domain-containing protein.
    
 
 0.987
A0A4P9XNC1
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.969
A0A4P9XTP5
CNH domain-containing protein.
   
 
 0.936
A0A4P9XJZ0
Vacuolar sorting protein 39 domain 1-domain-containing protein.
   
 
 0.928
A0A4P9XG85
Uncharacterized protein.
    
 
 0.913
A0A4P9XUK0
Pep3/Vps18/deep orange family-domain-containing protein.
    
 
 0.913
A0A4P9XUK9
RING-type domain-containing protein.
    
 
 0.913
A0A4P9XV97
Uncharacterized protein.
    
 
 0.913
A0A4P9XHE3
Small GTPase superfamily.
    
 
 0.830
A0A4P9XMJ8
Ras-domain-containing protein.
    
 
 0.830
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.