STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1IXC3CYTH-like domain-containing protein. (377 aa)    
Predicted Functional Partners:
A0A4P9XSL8
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.945
A0A4P9XT80
WD40-repeat-containing domain protein.
   
 0.945
A0A4P9XWI7
SCA7, zinc-binding domain-containing protein.
    
 0.944
A0A4V1IWR4
Transcription initiation factor TAFII31.
    
 0.944
A0A4P9XQP7
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.943
A0A4P9XPQ1
Transcription initiation factor TFIID 23-30kDa subunit-domain-containing protein.
    
 0.939
A0A4P9XXB2
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
 0.933
A0A4P9XHX1
SGF29 tudor-like domain-containing protein.
    
 0.927
A0A4V1IXD9
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.924
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.897
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.