STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1IXF5Ribosomal L28e protein family-domain-containing protein. (268 aa)    
Predicted Functional Partners:
A0A4V1IWT6
Anticodon-binding protein.
   
 
 0.996
A0A4P9XM15
Ribosomal protein L24e-domain-containing protein.
   
   0.992
A0A4P9XRW9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.992
A0A4P9XNV2
Eukaryotic rRNA processing.
   
 
 0.990
A0A4P9XRR7
Uncharacterized protein.
   
 
 0.990
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.989
A0A4V1IX46
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.989
A0A4P9XL06
Ribosomal protein L1/ribosomal biogenesis protein.
   
 
 0.986
A0A4P9XU18
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.986
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.985
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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