STRINGSTRING
CISD3 protein (Latimeria chalumnae) - STRING interaction network
"CISD3" - CDGSH iron sulfur domain 3 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISD3CDGSH iron sulfur domain 3 (130 aa)    
Predicted Functional Partners:
CISD1
CDGSH iron sulfur domain 1 (108 aa)
     
   
  0.623
CISD2
CDGSH iron sulfur domain 2 (134 aa)
     
   
  0.586
ECT2
Epithelial cell transforming sequence 2 oncogene (919 aa)
           
  0.451
DHX16
DEAH (Asp-Glu-Ala-His) box polypeptide 16 (593 aa)
     
 
  0.438
DHX8
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (1211 aa)
     
 
  0.438
OXA1L
Oxidase (cytochrome c) assembly 1-like (451 aa)
           
  0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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