CISD3 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CISD3

Uncharacterized protein. (130 aa)

Predicted Functional Partners:

CISD1

0.941

SURF1

0.756

RPL27A

0.731

NDUFS1

0.691

CPEB2

0.688

CISD2

0.661

MRPL24

0.632

RPL28

0.628

MRPL17

0.618

GPR75

0.615

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CISD1	CISD3	ENSLACP00000001475	ENSLACP00000000033	Zgc:110843.	Uncharacterized protein.	0.941
CISD2	CISD3	ENSLACP00000005102	ENSLACP00000000033	CDGSH iron sulfur domain 2.	Uncharacterized protein.	0.661
CISD3	CISD1	ENSLACP00000000033	ENSLACP00000001475	Uncharacterized protein.	Zgc:110843.	0.941
CISD3	CISD2	ENSLACP00000000033	ENSLACP00000005102	Uncharacterized protein.	CDGSH iron sulfur domain 2.	0.661
CISD3	CPEB2	ENSLACP00000000033	ENSLACP00000011397	Uncharacterized protein.	Uncharacterized protein.	0.688
CISD3	GPR75	ENSLACP00000000033	ENSLACP00000007351	Uncharacterized protein.	G protein-coupled receptor 75.	0.615
CISD3	MRPL17	ENSLACP00000000033	ENSLACP00000017389	Uncharacterized protein.	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.618
CISD3	MRPL24	ENSLACP00000000033	ENSLACP00000018881	Uncharacterized protein.	Mitochondrial ribosomal protein L24.	0.632
CISD3	NDUFS1	ENSLACP00000000033	ENSLACP00000017699	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.	0.691
CISD3	RPL27A	ENSLACP00000000033	ENSLACP00000018889	Uncharacterized protein.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.731
CISD3	RPL28	ENSLACP00000000033	ENSLACP00000013384	Uncharacterized protein.	Ribosomal protein L28.	0.628
CISD3	SURF1	ENSLACP00000000033	ENSLACP00000020748	Uncharacterized protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.756
CPEB2	CISD3	ENSLACP00000011397	ENSLACP00000000033	Uncharacterized protein.	Uncharacterized protein.	0.688
GPR75	CISD3	ENSLACP00000007351	ENSLACP00000000033	G protein-coupled receptor 75.	Uncharacterized protein.	0.615
MRPL17	CISD3	ENSLACP00000017389	ENSLACP00000000033	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Uncharacterized protein.	0.618
MRPL17	MRPL24	ENSLACP00000017389	ENSLACP00000018881	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L24.	0.970
MRPL17	RPL27A	ENSLACP00000017389	ENSLACP00000018889	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.934
MRPL24	CISD3	ENSLACP00000018881	ENSLACP00000000033	Mitochondrial ribosomal protein L24.	Uncharacterized protein.	0.632
MRPL24	MRPL17	ENSLACP00000018881	ENSLACP00000017389	Mitochondrial ribosomal protein L24.	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.970
MRPL24	RPL27A	ENSLACP00000018881	ENSLACP00000018889	Mitochondrial ribosomal protein L24.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.816