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PBX2 protein (Latimeria chalumnae) - STRING interaction network
"PBX2" - pre-B-cell leukemia homeobox 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX2pre-B-cell leukemia homeobox 2 (269 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1 (309 aa)
     
  0.902
MEIS1
Meis homeobox 1 (466 aa)
     
0.838
MEIS2
Meis homeobox 2 (477 aa)
     
0.835
MEIS3
Meis homeobox 3 (452 aa)
     
0.835
HOXA5
Homeobox A5 (269 aa)
       
  0.797
HOXB7
Homeobox B7 (216 aa)
       
  0.763
HOXD4
Homeobox D4 (251 aa)
       
  0.750
HOXD9
Homeobox D9 (268 aa)
       
 
  0.745
HOXA6
Homeobox A6 (230 aa)
       
  0.725
HOXD1
Homeobox D1 (312 aa)
     
  0.705
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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