STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBX2Homeobox domain-containing protein. (269 aa)    
Predicted Functional Partners:
HOXB6
Homeobox B6.
    
 0.765
HOXB7
Homeobox B7.
    
 0.724
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.671
MEIS1
Meis homeobox 1.
   
 0.659
GPSM2
G protein signaling modulator 2, like.
      
 0.659
MEIS2
Meis homeobox 2.
   
 0.659
RGL2
Uncharacterized protein.
      
 0.658
PSMB8
Proteasome subunit beta.
      
 0.658
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
      
 0.657
HOXB1
Homeobox B1.
    
 0.657
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.