STRINGSTRING
BLOC1S6 protein (Latimeria chalumnae) - STRING interaction network
"BLOC1S6" - Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLOC1S6Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin (117 aa)    
Predicted Functional Partners:
DTNBP1
Dystrobrevin binding protein 1 (355 aa)
       
  0.832
BLOC1S3
Biogenesis of lysosomal organelles complex-1, subunit 3 (190 aa)
     
  0.824
BLOC1S1
Biogenesis of lysosomal organelles complex-1, subunit 1 (125 aa)
       
  0.819
BLOC1S4
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino (228 aa)
     
  0.777
SNAPIN
SNAP-associated protein (137 aa)
       
  0.702
BLOC1S2
Biogenesis of lysosomal organelles complex-1, subunit 2 (185 aa)
     
 
  0.615
HPS6
Hermansky-Pudlak syndrome 6 (802 aa)
           
  0.604
DNAJC6
DnaJ (Hsp40) homolog, subfamily C, member 6 (993 aa)
     
 
    0.479
HPS4
Hermansky-Pudlak syndrome 4 (720 aa)
     
   
  0.440
HPS1
Hermansky-Pudlak syndrome 1 (699 aa)
     
   
  0.430
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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