STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLOC1S6Biogenesis of lysosomal organelles complex 1 subunit 6. (117 aa)    
Predicted Functional Partners:
BLOC1S1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 0.985
MIPOL1
Mirror-image polydactyly 1.
   
    0.974
BLOC1S4
Biogenesis of lysosomal organelles complex 1 subunit 4.
   
 0.957
BLOC1S3
Biogenesis of lysosomal organelles complex-1, subunit 3.
    
 0.945
SNAPIN
SNAP associated protein.
    
 0.855
BLOC1S5
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
    
 
 0.854
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.825
DTNBP1
Dystrobrevin binding protein 1.
    
 0.788
TXNDC5
Thioredoxin domain containing 5.
   
 
  0.705
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
      
 0.686
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.