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STRINGSTRING
WDR55 protein (Latimeria chalumnae) - STRING interaction network
"WDR55" - WD repeat domain 55 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR55WD repeat domain 55 (375 aa)    
Predicted Functional Partners:
WDR12
WD repeat domain 12 (339 aa)
     
 
  0.936
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (760 aa)
     
 
  0.867
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
   
  0.819
ZMAT2
Zinc finger, matrin type 2 (199 aa)
     
   
  0.798
TAF7
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (366 aa)
           
  0.788
RPF2
Ribosome production factor 2 homolog (S. cerevisiae) (309 aa)
     
      0.778
RRP9
Ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) (495 aa)
   
        0.739
WDR46
WD repeat domain 46 (614 aa)
     
        0.715
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
        0.715
DDB1
Damage-specific DNA binding protein 1, 127kDa (1142 aa)
       
 
  0.707
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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