STRINGSTRING
WDR55 protein (Latimeria chalumnae) - STRING interaction network
"WDR55" - WD repeat domain 55 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR55WD repeat domain 55 (375 aa)    
Predicted Functional Partners:
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
        0.553
DND1
Dead end homolog 1 (zebrafish) (402 aa)
     
   
  0.545
ZMAT2
Zinc finger, matrin-type 2 (199 aa)
           
  0.542
PCDH11Y
Protocadherin-11 X-linked (1013 aa)
           
  0.541
PCDH9
Protocadherin 9 (1032 aa)
           
  0.541
IK
IK cytokine, down-regulator of HLA II (571 aa)
 
 
        0.522
RPF2
Ribosome production factor 2 homolog (S. cerevisiae) (309 aa)
     
      0.517
DCHS1
Dachsous 1 (Drosophila) (1697 aa)
           
  0.502
PCDH7
Protocadherin 7 (1051 aa)
           
  0.491
PCDH10
Protocadherin 10 (996 aa)
           
  0.491
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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