STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOLR1Folate receptor. (225 aa)    
Predicted Functional Partners:
RTBDN
Zgc:109949.
  
  
  0.927
LOC102354947
Folate_rec domain-containing protein.
  
  
 
0.911
H3BAW7_LATCH
Uncharacterized protein.
   
  
 0.614
SLC19A1
Solute carrier family 19 member 1.
      
 0.554
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.519
STX17
Syntaxin 17.
    
  0.509
DCST2
DC-STAMP domain containing 2.
      
 0.473
CTSC
Cathepsin C; Belongs to the peptidase C1 family.
   
 
  0.456
H3AW50_LATCH
PB1 domain-containing protein.
    
  0.456
H3B0U5_LATCH
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
  0.456
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.