Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BTBD1BTB domain containing 1. (203 aa)    
Predicted Functional Partners:
H3BDW5_LATCH
BTB domain-containing protein.
 
     0.938
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.870
COPS2
COP9 signalosome subunit 2.
   
  0.806
COPS3
COP9 signalosome subunit 3.
    
 0.805
COPS5
COP9 signalosome subunit 5.
    
  0.802
COPS8
COP9 signalosome subunit 8.
    
  0.785
COPS6
COP9 signalosome subunit 6.
    
  0.765
COPS4
COP9 signalosome subunit 4.
    
  0.740
UBE2M
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.711
GPS1
G protein pathway suppressor 1.
   
  0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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