STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUCA2Alpha-L-fucosidase 2. (384 aa)    
Predicted Functional Partners:
SLC22A23
Solute carrier family 22 member 23.
      
 0.767
SNX9
Sorting nexin 9.
   
  
 0.719
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
      
 0.688
COASY
Coenzyme A synthase.
      
 0.612
AK2
Adenylate kinase 2; Belongs to the adenylate kinase family.
      
 0.589
PGM1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
      
 0.581
SLC22A31
Solute carrier family 22 member 31.
      
 0.561
IGF2R
Uncharacterized protein.
      
 0.545
ATF1
Activating transcription factor 1.
      
 0.538
GLB1
Galactosidase beta 1; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.515
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.