Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FUCA2Alpha-L-fucosidase 2. (384 aa)    
Predicted Functional Partners:
FUCA1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
  
 
0.910
LTV1
LTV1 ribosome biogenesis factor.
      
 0.846
AK2
Adenylate kinase 2; Belongs to the adenylate kinase family.
      
 0.828
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.806
PGM1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
      
 0.794
SNX9
Sorting nexin 9.
   
  
 0.785
SLC22A23
Solute carrier family 22 member 23.
      
 0.764
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
      
 0.739
ADAT2
Adenosine deaminase tRNA specific 2.
      
 0.675
ATF1
Activating transcription factor 1.
      
 0.651
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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