Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTFR1LMitochondrial fission regulator 1 like. (223 aa)    
Predicted Functional Partners:
ARMC1
Armadillo repeat-containing protein 1.
    
 
 0.937
H3AHQ2_LATCH
Uncharacterized protein.
    
 
 0.726
CSTF1
Cleavage stimulation factor subunit 1.
      
 0.690
TATDN2
Uncharacterized protein.
      
 0.685
SLC12A8
Solute carrier family 12 member 8.
      
 0.632
H3BFJ3_LATCH
VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.625
CCDC77
Coiled-coil domain containing 77.
   
  
 0.620
USP30
Ubiquitin carboxyl-terminal hydrolase.
      
 0.615
VPS39
VPS39 subunit of HOPS complex.
      
 0.593
LRRC49
Leucine rich repeat containing 49.
      
 0.593
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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