STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102350617Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
GPATCH1
G-patch domain containing 1.
      
 0.588
LOC102364611
Uncharacterized protein; Belongs to the RNase T2 family.
      
 0.533
FAM234B
Uncharacterized protein.
      
 0.518
SORD
Sorbitol dehydrogenase.
      
 0.507
EXOSC4
Exosome component 4.
      
 0.477
PLEKHJ1
Pleckstrin homology domain containing J1.
      
 0.468
RFWD3
Ring finger and WD repeat domain 3.
    
 
 0.467
WDR59
WD repeat domain 59.
      
 0.467
EBNA1BP2
EBNA1 binding protein 2.
      
 0.453
H3B0S1_LATCH
Uncharacterized protein.
      
 0.453
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.