STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102350617Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
FAM234B
Uncharacterized protein.
      
 0.697
GPATCH1
G-patch domain containing 1.
      
 0.685
LOC102364611
Uncharacterized protein; Belongs to the RNase T2 family.
      
 0.578
EXOSC4
Exosome component 4.
      
 0.553
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.538
PLEKHJ1
Pleckstrin homology domain containing J1.
      
 0.505
RFWD3
Ring finger and WD repeat domain 3.
    
 
 0.484
WDR59
WD repeat domain 59.
      
 0.472
SORD
Sorbitol dehydrogenase.
      
 0.457
EBNA1BP2
EBNA1 binding protein 2.
      
 0.442
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.