STRINGSTRING
KDELR1 protein (Latimeria chalumnae) - STRING interaction network
"KDELR1" - KDEL in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDELR1KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 (151 aa)    
Predicted Functional Partners:
SEC22B
Uncharacterized protein (215 aa)
     
 
  0.696
ENSLACG00000005244
Uncharacterized protein (216 aa)
     
 
  0.696
TMED10
Transmembrane emp24-like trafficking protein 10 (yeast) (207 aa)
     
  0.694
SURF4
Surfeit 4 (272 aa)
     
  0.675
ENSLACG00000009734
Uncharacterized protein (274 aa)
     
  0.675
SEC22A
SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (304 aa)
     
 
  0.663
SEC22C
SEC22 vesicle trafficking protein homolog C (S. cerevisiae) (66 aa)
     
 
  0.663
ENSLACG00000001221
Uncharacterized protein (109 aa)
     
  0.663
COPZ2
Coatomer protein complex, subunit zeta 2 (187 aa)
     
 
  0.660
COPZ1
Coatomer protein complex, subunit zeta 1 (193 aa)
     
 
  0.660
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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