STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEIG1Meiosis/spermiogenesis associated 1. (96 aa)    
Predicted Functional Partners:
SPAG6
Sperm associated antigen 6.
      
 0.846
PACRG
PARK2 co-regulated.
    
 
 0.717
HOOK1
Hook microtubule tethering protein 1.
      
 0.629
ACBD7
Acyl-CoA binding domain containing 7.
      
 0.589
DBI
Diazepam binding inhibitor, acyl-CoA binding protein.
      
 0.589
PHYHIPL
Phytanoyl-CoA 2-hydroxylase interacting protein like.
      
 0.578
LOC102363742
Uncharacterized protein; Belongs to the peptidase C14A family.
      
 0.568
PACRGL
Parkin coregulated like.
    
 
 0.567
SPAG16
WD_REPEATS_REGION domain-containing protein.
    
 
 0.567
PPDPF
Pancreatic progenitor cell differentiation and proliferation factor.
      
 0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.