STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEIG1Meiosis/spermiogenesis associated 1. (96 aa)    
Predicted Functional Partners:
PACRG
PARK2 co-regulated.
    
 
 0.921
PACRGL
Parkin coregulated like.
    
 
 0.831
SPAG6
Sperm associated antigen 6.
      
 0.685
LOC102360035
RIIa domain-containing protein.
   
  
 0.615
ROPN1L
Rhophilin associated tail protein 1 like.
   
  
 0.585
TEKT2
Tektin 2.
   
  
 0.551
SPAG16
WD_REPEATS_REGION domain-containing protein.
    
 
 0.457
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
      
 0.428
MORN3
MORN repeat containing 3.
   
  
 0.422
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.