STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBN1Ubinuclein 1. (1168 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin binding protein 1.
   
 0.997
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.990
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.983
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.903
LOC102351015
Histone H3.3.
    
 
 0.577
DAXX
Death-domain associated protein.
      
 0.552
RBBP7
WD_REPEATS_REGION domain-containing protein.
    
 
 0.509
H3AJV2_LATCH
PHD-type domain-containing protein.
     
 0.483
ATRX
ATRX chromatin remodeler.
     
 0.483
UPF1
UPF1 RNA helicase and ATPase.
   
  
 0.478
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.