STRINGSTRING
MDN1 protein (Latimeria chalumnae) - STRING interaction network
"MDN1" - Uncharacterized protein in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDN1Uncharacterized protein (376 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
 
  0.926
NLE1
Notchless homolog 1 (Drosophila) (488 aa)
     
 
  0.917
TEX10
Testis expressed 10 (930 aa)
     
 
  0.913
POLR1A
Polymerase (RNA) I polypeptide A, 194kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (917 aa)
     
        0.881
ENSLACG00000002247
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (802 aa)
     
        0.881
GNL2
Guanine nucleotide binding protein-like 2 (nucleolar) (731 aa)
     
 
  0.871
GTPBP4
GTP binding protein 4; Involved in the biogenesis of the 60S ribosomal subunit (634 aa)
     
 
  0.850
POLR1B
Polymerase (RNA) I polypeptide B, 128kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1135 aa)
     
 
  0.835
KIAA0664
KIAA0664 (1342 aa)
     
      0.822
UTP20
UTP20, small subunit (SSU) processome component, homolog (yeast) (2224 aa)
     
   
  0.822
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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