Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102352578Gb3_synth domain-containing protein. (326 aa)    
Predicted Functional Partners:
A3GALT2
Alpha 1,3-galactosyltransferase 2.
     
 0.916
B3GALNT1
Hexosyltransferase.
   
 
 0.912
LOC102355730
Uncharacterized protein.
   
 
 0.909
H2ZY94_LATCH
Si:dkey-199f5.8.
   
 
 0.909
LOC102355454
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
   
 
 0.909
B4GALT3
Uncharacterized protein.
   
 
 0.909
B4GALT2
Beta-1,4-galactosyltransferase 2.
   
 
 0.909
LOC102358769
Uncharacterized protein.
   
 
 0.909
B4GALT6
Beta-1,4-galactosyltransferase 6.
   
 
 0.904
HEXB
Beta-hexosaminidase.
   
 
 0.901
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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