STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZRR7_LATCHAa_trans domain-containing protein. (101 aa)    
Predicted Functional Partners:
RRAGB
Ras-related GTP binding A.
   
 0.550
RIMS2
Regulating synaptic membrane exocytosis 2a.
   
 
 0.538
RIMS2-2
Regulating synaptic membrane exocytosis 2.
   
 
 0.538
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 
 0.489
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.457
RRAGC
Ras related GTP binding C.
    
 0.446
RRAGD
Ras related GTP binding D.
    
 0.446
SLC38A9
Solute carrier family 38 member 9.
    
 
 0.426
ADGB
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
      
 0.424
MRPS25
Mitochondrial ribosomal protein S25.
      
 0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.