STRINGSTRING
ENSLACG00000000081 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000081" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000081Uncharacterized protein (312 aa)    
Predicted Functional Partners:
ENSLACG00000009728
Uncharacterized protein (3251 aa)
     
  0.742
ENSLACG00000004309
Uncharacterized protein (347 aa)
     
  0.742
RAN
RAN, member RAS oncogene family; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (147 aa)
     
  0.700
RANGAP1
Ran GTPase activating protein 1 (615 aa)
     
  0.593
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.573
UBA52
Uncharacterized protein (128 aa)
     
  0.573
KIF13A
Kinesin family member 13A (1741 aa)
     
  0.526
RCBTB1
Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 (531 aa)
 
     
0.521
SERGEF
Secretion regulating guanine nucleotide exchange factor (406 aa)
 
     
0.462
H2AFY2
H2A histone family, member Y2; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (376 aa)
     
  0.458
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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