Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPS30Mitochondrial ribosomal protein S30. (440 aa)    
Predicted Functional Partners:
MRPS22
Mitochondrial ribosomal protein S22.
   
 0.997
MRPS31
Mitochondrial ribosomal protein S31.
   
 0.994
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.994
MRPS23
Mitochondrial ribosomal protein S23.
   
 0.993
MRPS27
Mitochondrial ribosomal protein S27.
   
 0.992
MRPS17
Mitochondrial ribosomal protein S17.
   
 0.992
MRPS33
Mitochondrial ribosomal protein S33.
    
 0.991
MRPS7
Mitochondrial ribosomal protein S7.
   
 0.989
MRPL41
Mitochondrial ribosomal protein L41.
    
 
 0.989
MRPS2
Mitochondrial ribosomal protein S2.
    
 0.989
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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