STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZRW0_LATCHUncharacterized protein. (137 aa)    
Predicted Functional Partners:
H3AFQ4_LATCH
Uncharacterized protein.
  
  0.460
CD81
Tetraspanin.
    
  0.446
MAP2
Microtubule-associated protein.
    
   0.441
MAPT
Microtubule-associated protein.
    
   0.441
MCL1
MCL1 apoptosis regulator, BCL2 family member.
    
   0.410
H3AKC8_LATCH
Ig-like domain-containing protein.
  
  0.409
CD79A
CD79a molecule, immunoglobulin-associated alpha.
   
 0.405
H3AB65_LATCH
Uncharacterized protein.
  
  0.403
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.