STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102356000Uncharacterized protein. (211 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
LOC102345465
Uncharacterized protein.
    
 0.585
H3AN32_LATCH
Uncharacterized protein.
    
 0.585
DLG5
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
    
 
 0.509
KDM6A
Lysine (K)-specific demethylase 6A.
    
 0.494
KDM6B
Lysine demethylase 6B.
    
 0.494
H2ZWQ9_LATCH
WD_REPEATS_REGION domain-containing protein.
   
 0.482
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.473
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.473
LZTS1
Leucine zipper tumor suppressor 1.
    
   0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.