STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZSI5_LATCHUncharacterized protein. (91 aa)    
Predicted Functional Partners:
CFAP57
Cilia and flagella associated protein 57.
 
     0.611
H3A0S4_LATCH
Uncharacterized protein.
   
    0.530
CCDC81
Coiled-coil domain containing 81.
   
    0.530
ARID4A
AT-rich interaction domain 4A.
    
 0.471
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.460
WDR90
WD repeat domain 90.
   
  0.454
RSPH14
Radial spoke head 14 homolog.
   
 
 0.419
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.402
TSNAXIP1
Translin-associated factor X interacting protein 1.
   
 0.400
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.