STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZSQ8_LATCHUncharacterized protein. (197 aa)    
Predicted Functional Partners:
H2ZUX7_LATCH
DH domain-containing protein.
 
     0.945
FBXO16
F-box protein 16.
 
      0.899
LOC102345131
Si:ch1073-416j23.1.
   
 
 0.752
RACGAP1
Rac GTPase activating protein 1.
   
 
 0.752
TTK
TTK protein kinase.
   
  
 0.630
CEP55
Centrosomal protein 55.
   
 
 0.622
NCAPG
Non-SMC condensin I complex subunit G.
   
    0.602
ASPM
Abnormal spindle microtubule assembly.
   
   0.561
SPAG6
Sperm associated antigen 6.
   
   0.543
FLACC1
Uncharacterized protein.
   
    0.530
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.