Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CLASRPCLK4 associating serine/arginine rich protein. (630 aa)    
Predicted Functional Partners:
CLASP2
Cytoplasmic linker associated protein 2.
    
 
 0.876
PHLDB2
Pleckstrin homology like domain family B member 2.
      
 0.790
WDR90
WD repeat domain 90.
   
 
 0.733
SNIP1
Smad nuclear interacting protein 1.
   
 
 0.724
CLIP1
CAP-Gly domain containing linker protein 1.
      
 0.719
CCNL2
Cyclin L2; Belongs to the cyclin family.
   
  
 0.719
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.710
H3BEF8_LATCH
Cytoplasmic linker associated protein 1a.
    
 
 0.679
CLASP1
Uncharacterized protein.
    
 
 0.679
CLIP2
CAP-Gly domain containing linker protein 2.
      
 0.677
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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