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STRINGSTRING
ENSLACG00000000895 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000895" - Retinol binding protein 4, like in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000895Retinol binding protein 4, like (202 aa)    
Predicted Functional Partners:
PDE6G
Phosphodiesterase 6G, cGMP-specific, rod, gamma (101 aa)
     
   
  0.988
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (73 aa)
     
        0.976
PDE6C
Phosphodiesterase 6C, cGMP-specific, cone, alpha prime (838 aa)
     
   
  0.850
PPDPF
Pancreatic progenitor cell differentiation and proliferation factor (114 aa)
     
   
  0.653
ENSLACG00000007781
Cystatin C (amyloid angiopathy and cerebral hemorrhage); Belongs to the cystatin family (141 aa)
           
  0.622
GUCA1C
Guanylate cyclase activator 1C (191 aa)
     
   
  0.557
NDRG4
NDRG family member 4 (348 aa)
     
   
  0.548
PKNOX2
PBX/knotted 1 homeobox 2 (463 aa)
           
  0.546
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (285 aa)
           
  0.530
FBXO25
F-box protein 25 (335 aa)
           
  0.502
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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