Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363648Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (202 aa)    
Predicted Functional Partners:
GUCA1C
Guanylate cyclase activator 1C.
      
 0.591
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
    
 
 0.557
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 
 0.482
LOC102365300
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.469
CCDC58
Coiled-coil domain containing 58.
      
 0.454
RD3L
Retinal degeneration 3 like.
      
 0.453
SCG5
Secretogranin V.
    
   0.439
RBP3
Retinol binding protein 3.
   
  
 0.431
H3A0F4_LATCH
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
   0.426
PDE6G
Phosphodiesterase 6G.
   
  
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (36%) [HD]