STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363648Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (202 aa)    
Predicted Functional Partners:
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
    
 
 0.492
LOC102365332
Apolipoprotein Ea.
   
  
 0.457
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.457
CLUL1
Clusterin; Belongs to the clusterin family.
   
  
 0.451
APOA4
Apolipoprotein A4.
      
 0.408
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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