STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZUD3_LATCHUncharacterized protein. (150 aa)    
Predicted Functional Partners:
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
   
 0.979
H2ZZR1_LATCH
Uncharacterized protein.
 
  
  0.974
NAA38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.944
NAA25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
   
 0.833
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
    
 0.783
NAA20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
     
 0.738
NAA16
N(alpha)-acetyltransferase 16, NatA auxiliary subunit.
   
 
 0.719
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 
 0.719
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
     
 0.706
SNRPB
Small nuclear ribonucleoprotein-associated protein.
    
 0.661
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.