STRINGSTRING
RALYL protein (Latimeria chalumnae) - STRING interaction network
"RALYL" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALYLUncharacterized protein (162 aa)    
Predicted Functional Partners:
DHX8
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (1211 aa)
     
  0.933
YTHDC2
YTH domain containing 2 (1429 aa)
     
  0.918
ENSLACG00000009728
Uncharacterized protein (3251 aa)
     
  0.879
ENSLACG00000004309
Uncharacterized protein (347 aa)
     
  0.879
U2AF2
U2 small nuclear RNA auxiliary factor 2 (367 aa)
     
  0.857
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (504 aa)
     
  0.831
ACLY
ATP citrate lyase (978 aa)
     
 
  0.829
SF1
Splicing factor 1 (547 aa)
     
  0.819
PFAS
Phosphoribosylformylglycinamidine synthase (1082 aa)
     
 
  0.816
CWF19L2
CWF19-like 2, cell cycle control (S. pombe) (905 aa)
     
 
  0.815
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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