ARPIN protein (Latimeria chalumnae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ARPIN

Uncharacterized protein. (150 aa)

Predicted Functional Partners:

GAK

0.990

AP3D1

0.955

AP3B1

0.922

AP3B2

0.922

AP1G1

0.816

AP1G2

0.816

DNAJC6

0.812

AP4E1

0.801

AP3M1

0.743

AP3M2

0.743

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1G1	AP3B1	ENSLACP00000010241	ENSLACP00000018700	AP-1 complex subunit gamma.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.877
AP1G1	AP3B2	ENSLACP00000010241	ENSLACP00000018961	AP-1 complex subunit gamma.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.877
AP1G1	AP3D1	ENSLACP00000010241	ENSLACP00000011865	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit delta 1.	0.497
AP1G1	AP3M1	ENSLACP00000010241	ENSLACP00000004493	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit mu 1.	0.745
AP1G1	AP3M2	ENSLACP00000010241	ENSLACP00000014766	AP-1 complex subunit gamma.	AP-3 complex subunit mu-2.	0.745
AP1G1	AP4E1	ENSLACP00000010241	ENSLACP00000007967	AP-1 complex subunit gamma.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.662
AP1G1	ARPIN	ENSLACP00000010241	ENSLACP00000001014	AP-1 complex subunit gamma.	Uncharacterized protein.	0.816
AP1G1	DNAJC6	ENSLACP00000010241	ENSLACP00000004567	AP-1 complex subunit gamma.	DnaJ heat shock protein family (Hsp40) member C6.	0.759
AP1G1	GAK	ENSLACP00000010241	ENSLACP00000006296	AP-1 complex subunit gamma.	J domain-containing protein.	0.989
AP1G2	AP3B1	ENSLACP00000015022	ENSLACP00000018700	AP-1 complex subunit gamma.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.877
AP1G2	AP3B2	ENSLACP00000015022	ENSLACP00000018961	AP-1 complex subunit gamma.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.877
AP1G2	AP3D1	ENSLACP00000015022	ENSLACP00000011865	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit delta 1.	0.497
AP1G2	AP3M1	ENSLACP00000015022	ENSLACP00000004493	AP-1 complex subunit gamma.	Adaptor related protein complex 3 subunit mu 1.	0.745
AP1G2	AP3M2	ENSLACP00000015022	ENSLACP00000014766	AP-1 complex subunit gamma.	AP-3 complex subunit mu-2.	0.745
AP1G2	AP4E1	ENSLACP00000015022	ENSLACP00000007967	AP-1 complex subunit gamma.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.662
AP1G2	ARPIN	ENSLACP00000015022	ENSLACP00000001014	AP-1 complex subunit gamma.	Uncharacterized protein.	0.816
AP1G2	DNAJC6	ENSLACP00000015022	ENSLACP00000004567	AP-1 complex subunit gamma.	DnaJ heat shock protein family (Hsp40) member C6.	0.759
AP1G2	GAK	ENSLACP00000015022	ENSLACP00000006296	AP-1 complex subunit gamma.	J domain-containing protein.	0.989
AP3B1	AP1G1	ENSLACP00000018700	ENSLACP00000010241	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.877
AP3B1	AP1G2	ENSLACP00000018700	ENSLACP00000015022	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.877