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SDR42E2 protein (Latimeria chalumnae) - STRING interaction network
"SDR42E2" - Uncharacterized protein in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
SDR42E2Uncharacterized protein; Short chain dehydrogenase/reductase family 42E, member 2 (204 aa)    
Predicted Functional Partners:
LSS
Terpene cyclase/mutase family member; Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase); Belongs to the terpene cyclase/mutase family (735 aa)
   
 
  0.712
FDFT1
Farnesyl-diphosphate farnesyltransferase 1 (416 aa)
   
 
  0.708
C14orf1
Ergosterol biosynthesis 28 homolog; Chromosome 14 open reading frame 1 (143 aa)
     
 
  0.666
ENSLACG00000000209
Uncharacterized protein; Phosphoethanolamine methyltransferase (238 aa)
   
 
  0.655
CRAMP1
Cramped chromatin regulator homolog 1; Crm, cramped-like (Drosophila) (1286 aa)
           
  0.655
SIGMAR1
Sigma non-opioid intracellular receptor 1 (223 aa)
     
 
  0.653
NDUFAF2
NADH dehydrogenase (ubiquinone) complex I, assembly factor 2 (167 aa)
           
  0.651
LMOD3
Leiomodin 3 (fetal) (551 aa)
           
  0.647
TADA2B
Transcriptional adaptor 2 (ADA2 homolog, yeast)-beta (420 aa)
           
  0.647
CACNG1
Multifunctional fusion protein; This protein is a subunit of the dihydropyridine (DHP) sensitive calcium channel. Plays a role in excitation-contraction coupling. The skeletal muscle DHP-sensitive Ca(2+) channel may function only as a multiple subunit complex (226 aa)
           
  0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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