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GALNTL6 protein (Latimeria chalumnae) - STRING interaction network
"GALNTL6" - Polypeptide N-acetylgalactosaminyltransferase-like 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNTL6Polypeptide N-acetylgalactosaminyltransferase-like 6 (315 aa)    
Predicted Functional Partners:
ENSLACG00000018257
Uncharacterized protein (386 aa)
         
  0.913
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (361 aa)
         
  0.913
ENSLACG00000010204
Uncharacterized protein (270 aa)
         
  0.910
GCNT1
Glucosaminyl (N-acetyl) transferase 1, core 2 (428 aa)
         
  0.908
C1GALT1C1
C1GALT1-specific chaperone 1 (318 aa)
         
    0.900
ENSLACG00000002223
Uncharacterized protein (1101 aa)
       
    0.561
MUC22
Mucin 22 (1543 aa)
       
    0.559
MUC5B
Mucin 5AC, oligomeric mucus/gel-forming (2574 aa)
       
  0.551
ENSLACG00000008387
Uncharacterized protein (1963 aa)
       
  0.433
ENSLACG00000004195
Uncharacterized protein (2029 aa)
       
  0.433
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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