STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNTL6Polypeptide N-acetylgalactosaminyltransferase like 6. (315 aa)    
Predicted Functional Partners:
LOC102355534
Glyco_trans_2-like domain-containing protein.
 
  0.934
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.908
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.724
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
     
 0.693
LOC102346475
Uncharacterized protein.
     
 0.693
LOC102354637
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.693
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
      
 0.470
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.469
ZPLD1
Zona pellucida like domain containing 1.
      
 0.468
LOC102362977
Family with sequence similarity 162 member A.
      
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.