Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDRGK1DDRGK domain containing 1. (243 aa)    
Predicted Functional Partners:
UFL1
UFM1 specific ligase 1.
    
 
 0.987
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
    
 
 0.986
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
 
 0.984
UFM1
Ubiquitin fold modifier 1.
    
 
 0.974
SRPRA
SRP receptor subunit alpha.
    
 
 0.945
ATP6AP1
ATPase H+ transporting accessory protein 1.
     
 0.731
LOC102358523
Uncharacterized protein.
     
 0.731
UFSP2
UFM1 specific peptidase 2.
    
 
 0.693
VAPB
VAMP associated protein B and C.
     
 0.670
NEMF
Nuclear export mediator factor.
    
 
 0.661
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.