STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM268Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
TMEM266
Transmembrane protein 266.
      
 0.864
SLC35F4
Solute carrier family 35 member F4.
      
 0.785
CDHR2
Cadherin related family member 2.
      
 0.703
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
      
 0.580
AIFM1
Apoptosis inducing factor mitochondria associated 1.
      
 0.576
ATP6V1C1
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.541
LAMP1
Lysosomal associated membrane protein 1.
   
  
 0.510
SLC45A3
Solute carrier family 45 member 3.
      
 0.501
LOC102353803
Zgc:162160.
      
 0.501
KCNJ5
Potassium voltage-gated channel subfamily J member 5.
      
 0.501
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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