STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC171Coiled-coil domain containing 171. (1275 aa)    
Predicted Functional Partners:
LMOD1
Leiomodin 1.
      
 0.790
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.790
TCEANC2
Uncharacterized protein.
      
 0.698
PLCB4
Phosphoinositide phospholipase C.
     
 0.651
NUAK1
NUAK family kinase 1.
      
 0.644
CRTC3
CREB regulated transcription coactivator 3.
      
 0.641
CHST12
Carbohydrate sulfotransferase.
      
 0.591
NKAIN1
Sodium/potassium transporting ATPase interacting 1.
      
 0.587
NKAIN2
Sodium/potassium transporting ATPase interacting 2.
      
 0.587
LOC102360711
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
      
 0.558
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.