Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZUH0_LATCHUncharacterized protein. (1420 aa)    
Predicted Functional Partners:
H3AMW9_LATCH
Uncharacterized protein.
 
  
  0.975
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.972
H2ZUZ2_LATCH
Uncharacterized protein.
   
 0.914
WDR34
WD repeat domain 34.
    
 0.901
H3AK49_LATCH
Uncharacterized protein.
 
      0.898
LOC102345259
Uncharacterized protein.
 
   
  0.867
H3AGF3_LATCH
Uncharacterized protein.
 
 
   0.841
WDR19
WD repeat domain 19.
   
 
 0.774
DCTN1
Dynactin 1a.
   
 0.745
DNAI2
Dynein axonemal intermediate chain 2.
   
 0.744
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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