STRINGSTRING
SLC38A1 protein (Latimeria chalumnae) - STRING interaction network
"SLC38A1" - Solute carrier family 38, member 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A1Solute carrier family 38, member 1 (410 aa)    
Predicted Functional Partners:
SLC36A1
Proton-coupled amino acid transporter 1 (390 aa)
     
 
  0.555
SLC36A4
Solute carrier family 36 (proton/amino acid symporter), member 4 (101 aa)
     
 
  0.555
SLC1A7
Solute carrier family 1 (glutamate transporter), member 7 (497 aa)
   
   
  0.534
ACLY
ATP citrate lyase (978 aa)
     
   
  0.519
FTSJ1
FtsJ RNA methyltransferase homolog 1 (E. coli); Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (339 aa)
           
  0.502
ABAT
4-aminobutyrate aminotransferase (490 aa)
   
   
  0.487
ENSLACG00000013894
Solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (188 aa)
   
   
  0.422
SLC1A5
Solute carrier family 1 (neutral amino acid transporter), member 5 (565 aa)
   
   
  0.421
ENSLACG00000012536
Sodium channel protein ; Mediates the voltage-dependent sodium ion permeability of excitable membranes (1673 aa)
     
   
  0.402
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (5%) [HD]