STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZUJ5_LATCHUncharacterized protein. (421 aa)    
Predicted Functional Partners:
LYN
Tyrosine-protein kinase.
   
 0.658
B4GALT2
Beta-1,4-galactosyltransferase 2.
      
 0.555
LOC102347787
Sushi domain-containing protein.
   
  
 0.494
LOC102348047
Sushi domain-containing protein.
   
  
 0.494
LOC102349401
Ig-like domain-containing protein.
   
 0.487
LOC102358683
Tyrosinase_Cu-bd domain-containing protein.
   
 0.487
H3BC80_LATCH
Myeloid-specific peroxidase.
   
  
 0.431
P2RY13
Purinergic receptor P2Y13; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.425
H2ZYD7_LATCH
Protein kinase domain-containing protein.
   
 0.411
LCK
Tyrosine-protein kinase.
   
 0.411
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.