STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFHBEF-hand domain family member B. (578 aa)    
Predicted Functional Partners:
EFHC2
EF-hand domain containing 2.
   
 
 0.994
EFHC1
EF-hand domain containing 1.
   
 
 0.989
H3A079_LATCH
Uncharacterized protein.
   
 
 0.975
CFAP43
Cilia and flagella associated protein 43.
   
   0.972
TEKT2
Tektin 2.
   
 
 0.971
CFAP52
Cilia and flagella associated protein 52; Belongs to the peptidase C19 family.
   
 
 0.964
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.950
MNS1
Meiosis specific nuclear structural 1.
   
 
 0.948
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.942
TEKT1
Tektin 1.
   
   0.940
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.