STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNBP1Formin binding protein 1. (574 aa)    
Predicted Functional Partners:
NCKIPSD
NCK interacting protein with SH3 domain.
    
 
 0.825
C9orf78
Chromosome 9 open reading frame 78.
   
  
 0.786
ITSN2
Intersectin 2.
   
 0.780
SNX2
Sorting nexin 2.
    
 
 0.774
CDC42
Cell division cycle 42.
    
 0.756
TOR1B
Torsin.
      
 0.748
LOC102357229
WASP like actin nucleation promoting factor a.
   
 0.736
WAS
Uncharacterized protein.
   
 0.736
WASL
WASP like actin nucleation promoting factor.
   
 0.736
LOC102346266
Uncharacterized protein.
   
 0.736
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.