Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
H2ZUM6_LATCHReverse transcriptase domain-containing protein. (220 aa)    
Predicted Functional Partners:
H2ZTL0_LATCH
Integrase catalytic domain-containing protein.
  
     0.518
H3A0Q7_LATCH
RT_RNaseH domain-containing protein.
  
     0.515
H2ZTY8_LATCH
Integrase catalytic domain-containing protein.
  
     0.514
H3AA81_LATCH
Integrase catalytic domain-containing protein.
  
 
   0.510
H3B9Z3_LATCH
Reverse transcriptase domain-containing protein.
  
     0.509
H3ABM2_LATCH
Reverse transcriptase domain-containing protein.
  
     0.506
H3A2D1_LATCH
Integrase catalytic domain-containing protein.
  
 
   0.505
H2ZRV8_LATCH
Uncharacterized protein.
  
     0.503
H3B3F5_LATCH
Integrase catalytic domain-containing protein.
  
 
   0.503
H3AJ26_LATCH
Integrase catalytic domain-containing protein.
  
 
   0.500
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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