STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1023655592Fe-2S ferredoxin-type domain-containing protein. (178 aa)    
Predicted Functional Partners:
AOX1
FAD-binding PCMH-type domain-containing protein.
 
     0.951
SUOX
Sulfite oxidase.
      
 0.891
GDA
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.642
LOC102360643
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
  
 
 0.567
RIMS2
Regulating synaptic membrane exocytosis 2a.
    
   0.556
RIMS2-2
Regulating synaptic membrane exocytosis 2.
    
   0.556
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.548
LOC102365118
Uncharacterized protein.
  
 
 0.548
MOCS1
Molybdenum cofactor synthesis 1.
  
   
 0.523
ADAT2
Adenosine deaminase tRNA specific 2.
    
 0.492
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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