STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL38Mitochondrial ribosomal protein L38. (406 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.903
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.892
DAP3
Death associated protein 3.
   
 
 0.877
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.876
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.872
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.870
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.870
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.866
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.865
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.861
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.