STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM150ATransmembrane protein 150A. (274 aa)    
Predicted Functional Partners:
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.612
FAM126A
Family with sequence similarity 126 member A.
      
 0.554
OXR1
Oxidation resistance 1.
      
 0.551
FBXL15
F-box and leucine rich repeat protein 15.
      
 0.485
CUEDC2
CUE domain containing 2.
      
 0.479
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
      
 0.475
NECTIN3
Nectin cell adhesion molecule 3.
      
 0.465
LOC102358889
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
      
 0.439
H3B8Z6_LATCH
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
      
 0.439
FRMD4A
FERM domain containing 4A.
      
 0.432
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.