STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIN2Ras and Rab interactor 2. (902 aa)    
Predicted Functional Partners:
LOC102354752
VPS9 domain-containing protein.
    
0.701
RABGEF1
RAB guanine nucleotide exchange factor (GEF) 1.
    
0.701
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
      
 0.623
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
0.583
RAB5A
RAB5A, member RAS oncogene family.
    
 0.576
LOC102366232
RAB5B, member RAS oncogene family.
    
 0.576
RAB5C
RAB5C, member RAS oncogene family.
    
 0.576
RAB5B
RAB5B, member RAS oncogene family.
    
 0.576
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.556
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.552
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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